18 April 2023
Europe/Rome timezone

The genetic asset of seaweed microbiomes encompasses ecologically and biotechnologically prominent functions

18 Apr 2023, 09:30
25m

Speaker

Dr Antonio Placido (CNR-IBIOM)

Description

Seaweeds synthesize a wide range of halogenated metabolites(1-3). The fate of these metabolites remains largely unknown. To address this challenge, the genetic asset encoded by the associated microbiomes of three seaweeds has been annotated. A remarkable gene content potentially active in the degradation of a wide spectrum of halocarbons and haloaromatic molecules has been uncovered. These functional data, which may help in deciphering the still largely unknown role of microbial dark matter(4), support the hypothesis of considering macroalgae as holobionts, capable of managing the metabolism of halogenated compounds. Furthermore, this uncharted genetic diversity encompasses biotechnologically pivotal enzymes(5-8).

1 Moore R.E. Volatile compounds from marine algae. Acc. Chem. Res. 1977. Vol. 10, 40–47. https://doi.org/10.1021/ar50110a002
2 Gschwend P.M., MacFarlaneand. J.K., Newman K.A. Volatile Halogenated Organic Compounds Released to Seawater from Temperate Marine Macroalgae. Science 1985. Vol 227, 1033-1035. DOI: 10.1126/science.227.4690.10
3 Carsten P. and Pohnert G. Production and role of volatile halogenated compounds from marine algae. Nat. Prod. Rep. 2011, Vol. 28(2), 186-95. DOI: 10.1039/c0np00043d
4 Whitman W.B., Coleman D.C., Wiebe W.J. Prokaryotes: the unseen majority. PNAS 1998. Vol. 95, 6578-83. DOI: 10.1073/pnas.95.12.6578
5 Agarwal V., Miles Z.D., Winter J.M., Eustáquio A.S., El Gamal A.A., and Moore B.S. Enzymatic halogenation and dehalogenation reactions: pervasive and mechanistically diverse. Chem Rev. 2017. Vol. 117, 5619–5674. DOI: 10.1021/acs.chemrev.6b00571
6 Atashgahi S., Sánchez-Andrea I., Heipieper H., Van der Meer J.R., Stams A.J.M., Smidt H. Prospects for harnessing biocide resistance for bioremediation and detoxification. Science 2018. Vol. 360, 743-746. DOI: 10.1126/science.aar3778
7 Bao-Anh Thi Nguyen, Ju-Liang Hsieh, Shou-ChenLo, Sui-YuanWang, Chun Hsiung-Hung, Eugene Huang, Shih-HsunHung, Wei-ChihChin, Chieh-ChenHuang. Biodegradation of dioxins by Burkholderia cenocepacia strain 869T2: Role of 2-haloacid dehalogenase. Journal of Hazardous Materials 2021. Vol 401, 123347. DOI: 10.1016/j.jhazmat.2020.123347
8 Cros A., Alfaro-Espinoza G., De Maria A., Wirth T., Nikel P. I. Synthetic metabolism for biohalogenation. Curr Opin Biotechnol 2022. Vol.74, 180-193. DOI: 10.1016/j.copbio.2021.11.009

Presentation Materials

There are no materials yet.