The role of stereochemistry in the inhibition of Aβ Amyloid growth and toxicity by silybins.

5 Oct 2021, 11:30
15m
Talk Session

Speaker

Dr Michele F.M. Sciacca (CNR - Istituto di Cristallografia)

Description

The self-assembling of the amyloid β (Aβ) is considered an hallmark in the pathogenesis of Alzheimer’s disease (AD). Many efforts have been devoted in designing molecules able to halt disease progression by inhibiting Aβ self-assembly. We combine biophysical, biochemical and computational techniques to investigate the capacity of four optically pure components of the natural product silymarin (silybin A, silybin B, 2,3-dehydrosilybin A, 2,3-dehydrosilybin B) to inhibit Aβ aggregation. TEM analysis demonstrated that all the four investigated flavonoids prevent the formation of mature fibrils, however ThT assays, WB and AFM investigations showed that only silybin B was able inhibit the formation of small protofiber (considered the most toxic species) diverting the aggregation toward the formation of large amorphous aggregates. By using molecular dynamics (MD) simulations we observed that silybin B interacts mainly with the C-terminal hydrophobic segment 35MVGGVV40 of Aβ40 and the peptide conformation remains predominantly unstructured along all the simulations. By contrast, silybin A interacts preferentially with the segments 17LVFF20 and 27NKGAII32 of Aβ40 which shows a high tendency to form bend, turn, and β-sheet conformation in and around these two domains. Both 2,3-dehydrosilybin enantiomers bind preferentially the segment 17LVFF20 but lead to the formation of different small-sized, ThT-positive Aβ aggregates. Finally, in vivo studies in a transgenic Caenorhabditis elegans strain expressing human Aβ indicated that silybin B is the most effective of the four compounds in counteracting Aβ proteotoxicity. This study underscores the pivotal role of stereochemistry in determining the neuroprotective potential of silybins and points to silybin B as a promising lead compound for further development in anti-AD therapeutics.

Primary authors

Dr Michele F.M. Sciacca (CNR - Istituto di Cristallografia) Dr Valeria Romanucci (Università Federico II- Dipartimento di scienze chimiche) Dr Armando Zarelli (Università Federico II- Dipartimento di scienze chimiche) Dr Irene Monaco (CNR - Isituto di Cristallografia) Dr Fabio Lolicato (Department of Physics, University of Helsinki) Dr Natalia Spinella (STMicroelectronics) Dr Clelia Galati (STMicroelectronics) Dr Giuseppe Grasso (Dipartimento di Scienze Chimiche, Università degli Studi di Catania) Dr Luisa D'Urso (Dipartimento di Scienze Chimiche, Università degli Studi di Catania) Dr Margherita Romeo (IRCCS-Istituto di Ricerche Farmacologiche “Mario Negri”) Dr Luisa Diomede ( IRCCS-Istituto di Ricerche Farmacologiche “Mario Negri”) Dr Mario Salmona ( IRCCS-Istituto di Ricerche Farmacologiche “Mario Negri”) Dr Corrado Bongiorno (CNR - Istituto di Microelettronica e Microsistemi) Prof. Giovanni Di Fabio (Department of Chemical Sciences, University of Napoli “Federico II”) Dr Carmelo La Rosa (Dipartimento di Scienze Chimiche, Università degli Studi di Catania) Dr Danilo Milardi (CNR - Istituto di Cristallografia)

Presentation Materials